I put my BFR cases in the closet where gigging is concerned. They're beautiful, and I'm not ruining that leather. LOL So, for working purposes, I prefer the SKB. When I want to show my guitar to a friend who has wanted to see a JP in person... I take the BFR case...
When you're spending that much money for a guitar, it is nice that the special editions have a special case. Surely grabbing a plastic case for gigging isn't that big a deal if you're buying a 2500 dollar plus guitar. The only thing that I wish is that EB would sell the SKB version (with the ability to leave the trem in) on their website. I'd rather buy a case from them than someone else, but I understand that the logistics of that are iffy (I don't know of a guitar company that likes dealing with cases LOL).